Overview

This skill provides comprehensive tools for AI engineers and researchers to publish, manage, and link research papers on the Hugging Face Hub. It streamlines the workflow from paper creation to publication, including integration with arXiv, model/dataset linking, and authorship management.

Integration with HF Ecosystem

Paper Pages

Index and discover papers on Hugging Face Hub

arXiv Integration

Automatic paper indexing from arXiv IDs

Model/Dataset Linking

Connect papers to relevant artifacts through metadata

Authorship Verification

Claim and verify paper authorship

Research Article Template

Generate professional, modern scientific papers

Version

1.0.0

Dependencies

The included script uses PEP 723 inline dependencies. Prefer

uv run

over

manual environment setup.

huggingface_hub>=0.26.0

pyyaml>=6.0.3

requests>=2.32.5

markdown>=3.5.0

python-dotenv>=1.2.1

Core Capabilities

1. Paper Page Management

Index Papers

Add papers to Hugging Face from arXiv

Claim Authorship

Verify and claim authorship on published papers

Manage Visibility

Control which papers appear on your profile

Paper Discovery

Find and explore papers in the HF ecosystem

2. Link Papers to Artifacts

Model Cards

Add paper citations to model metadata

Dataset Cards

Link papers to datasets via README

Automatic Tagging

Hub auto-generates arxiv: tags

Citation Management

Maintain proper attribution and references

3. Research Article Creation

Markdown Templates

Generate professional paper formatting

Modern Design

Clean, readable research article layouts

Dynamic TOC

Automatic table of contents generation

Section Structure

Standard scientific paper organization

LaTeX Math

Support for equations and technical notation

4. Metadata Management

YAML Frontmatter

Proper model/dataset card metadata

Citation Tracking

Maintain paper references across repositories

Version Control

Track paper updates and revisions

Multi-Paper Support

Link multiple papers to single artifacts Usage Instructions The skill includes Python scripts in scripts/ for paper publishing operations. Prerequisites Run scripts with uv run (dependencies are resolved from the script header) Set HF_TOKEN environment variable with Write-access token All paths are relative to the directory containing this SKILL.md file. Before running any script, first cd to that directory or use the full path. Method 1: Index Paper from arXiv Add a paper to Hugging Face Paper Pages from arXiv. Basic Usage: uv run scripts/paper_manager.py index \ --arxiv-id "2301.12345" Check If Paper Exists: uv run scripts/paper_manager.py check \ --arxiv-id "2301.12345" Direct URL Access: You can also visit https://huggingface.co/papers/{arxiv-id} directly to index a paper. Method 2: Link Paper to Model/Dataset Add paper references to model or dataset README with proper YAML metadata. Add to Model Card: uv run scripts/paper_manager.py link \ --repo-id "username/model-name" \ --repo-type "model" \ --arxiv-id "2301.12345" Add to Dataset Card: uv run scripts/paper_manager.py link \ --repo-id "username/dataset-name" \ --repo-type "dataset" \ --arxiv-id "2301.12345" Add Multiple Papers: uv run scripts/paper_manager.py link \ --repo-id "username/model-name" \ --repo-type "model" \ --arxiv-ids "2301.12345,2302.67890,2303.11111" With Custom Citation: uv run scripts/paper_manager.py link \ --repo-id "username/model-name" \ --repo-type "model" \ --arxiv-id "2301.12345" \ --citation " $( cat citation.txt ) " How Linking Works When you add an arXiv paper link to a model or dataset README: The Hub extracts the arXiv ID from the link A tag arxiv: is automatically added to the repository Users can click the tag to view the Paper Page The Paper Page shows all models/datasets citing this paper Papers are discoverable through filters and search Method 3: Claim Authorship Verify your authorship on papers published on Hugging Face. Start Claim Process: uv run scripts/paper_manager.py claim \ --arxiv-id "2301.12345" \ --email "your.email@institution.edu" Manual Process: Navigate to your paper's page: https://huggingface.co/papers/{arxiv-id} Find your name in the author list Click your name and select "Claim authorship" Wait for admin team verification Check Authorship Status: uv run scripts/paper_manager.py check-authorship \ --arxiv-id "2301.12345" Method 4: Manage Paper Visibility Control which verified papers appear on your public profile. List Your Papers: uv run scripts/paper_manager.py list-my-papers Toggle Visibility: uv run scripts/paper_manager.py toggle-visibility \ --arxiv-id "2301.12345" \ --show true Manage in Settings: Navigate to your account settings → Papers section to toggle "Show on profile" for each paper. Method 5: Create Research Article Generate a professional markdown-based research paper using modern templates. Create from Template: uv run scripts/paper_manager.py create \ --template "standard" \ --title "Your Paper Title" \ --output "paper.md" Available Templates: standard - Traditional scientific paper structure modern - Clean, web-friendly format inspired by Distill arxiv - arXiv-style formatting ml-report - Machine learning experiment report Generate Complete Paper: uv run scripts/paper_manager.py create \ --template "modern" \ --title "Fine-Tuning Large Language Models with LoRA" \ --authors "Jane Doe, John Smith" \ --abstract " $( cat abstract.txt ) " \ --output "paper.md" Convert to HTML: uv run scripts/paper_manager.py convert \ --input "paper.md" \ --output "paper.html" \ --style "modern" Paper Template Structure Standard Research Paper Sections:

title : Your Paper Title authors : Jane Doe , John Smith affiliations : University X , Lab Y date : 2025-01-15 arxiv : 2301.12345 tags : [ machine - learning , nlp , fine - tuning ]

Abstract Brief summary of the paper...

1. Introduction Background and motivation...

1. Related Work Previous research and context...

1. Methodology Approach and implementation...

1. Experiments Setup, datasets, and procedures...

1. Results Findings and analysis...

1. Discussion Interpretation and implications...

1. Conclusion Summary and future work...

References Modern Template Features: Dynamic table of contents Responsive design for web viewing Code syntax highlighting Interactive figures and charts Math equation rendering (LaTeX) Citation management Author affiliation linking Commands Reference Index Paper: uv run scripts/paper_manager.py index --arxiv-id "2301.12345" Link to Repository: uv run scripts/paper_manager.py link \ --repo-id "username/repo-name" \ --repo-type "model|dataset|space" \ --arxiv-id "2301.12345" \ [ --citation "Full citation text" ] \ [ --create-pr ] Claim Authorship: uv run scripts/paper_manager.py claim \ --arxiv-id "2301.12345" \ --email "your.email@edu" Manage Visibility: uv run scripts/paper_manager.py toggle-visibility \ --arxiv-id "2301.12345" \ --show true | false Create Research Article: uv run scripts/paper_manager.py create \ --template "standard|modern|arxiv|ml-report" \ --title "Paper Title" \ [ --authors "Author1, Author2" ] \ [ --abstract "Abstract text" ] \ [ --output "filename.md" ] Convert Markdown to HTML: uv run scripts/paper_manager.py convert \ --input "paper.md" \ --output "paper.html" \ [ --style "modern|classic" ] Check Paper Status: uv run scripts/paper_manager.py check --arxiv-id "2301.12345" List Your Papers: uv run scripts/paper_manager.py list-my-papers Search Papers: uv run scripts/paper_manager.py search --query "transformer attention" YAML Metadata Format When linking papers to models or datasets, proper YAML frontmatter is required: Model Card Example:

language : - en license : apache - 2.0 tags : - text - generation - transformers - llm library_name : transformers

Model Name

This model is based on the approach described in [ Our Paper ] (https : //arxiv.org/abs/2301.12345).

Citation

bibtex @article { doe2023paper , title= { Your Paper Title } , author= { Doe , Jane and Smith , John } , journal= { arXiv preprint arXiv : 2301.12345 } , year= { 2023 } } **Dataset Card Example:**yaml

language: - en license: cc-by-4.0 task_categories: - text-generation - question-answering size_categories: - 10K<n<100K

Dataset Name

Dataset introduced in Our Paper. For more details, see the paper page. The Hub automatically extracts arXiv IDs from these links and creates arxiv:2301.12345 tags. Integration Examples Workflow 1: Publish New Research

1. Create research article

uv run scripts/paper_manager.py create \ --template "modern" \ --title "Novel Fine-Tuning Approach" \ --output "paper.md"

2. Edit paper.md with your content

3. Submit to arXiv (external process)

Upload to arxiv.org, get arXiv ID

4. Index on Hugging Face

uv run scripts/paper_manager.py index --arxiv-id "2301.12345"

5. Link to your model

uv run scripts/paper_manager.py link \ --repo-id "your-username/your-model" \ --repo-type "model" \ --arxiv-id "2301.12345"

6. Claim authorship

uv run scripts/paper_manager.py claim \ --arxiv-id "2301.12345" \ --email "your.email@edu" Workflow 2: Link Existing Paper

1. Check if paper exists

uv run scripts/paper_manager.py check --arxiv-id "2301.12345"

2. Index if needed

uv run scripts/paper_manager.py index --arxiv-id "2301.12345"

3. Link to multiple repositories

uv run scripts/paper_manager.py link \ --repo-id "username/model-v1" \ --repo-type "model" \ --arxiv-id "2301.12345" uv run scripts/paper_manager.py link \ --repo-id "username/training-data" \ --repo-type "dataset" \ --arxiv-id "2301.12345" uv run scripts/paper_manager.py link \ --repo-id "username/demo-space" \ --repo-type "space" \ --arxiv-id "2301.12345" Workflow 3: Update Model with Paper Reference

1. Get current README

hf download username/model-name README.md

2. Add paper link

uv run scripts/paper_manager.py link \ --repo-id "username/model-name" \ --repo-type "model" \ --arxiv-id "2301.12345" \ --citation "Full citation for the paper"

The script will:

- Add YAML metadata if missing

- Insert arXiv link in README

- Add formatted citation

- Preserve existing content

Best Practices Paper Indexing Index papers as soon as they're published on arXiv Include full citation information in model/dataset cards Use consistent paper references across related repositories Metadata Management Add YAML frontmatter to all model/dataset cards Include proper licensing information Tag with relevant task categories and domains Authorship Claim authorship on papers where you're listed as author Use institutional email addresses for verification Keep paper visibility settings updated Repository Linking Link papers to all relevant models, datasets, and Spaces Include paper context in README descriptions Add BibTeX citations for easy reference Research Articles Use templates consistently within projects Include code and data links in papers Generate web-friendly HTML versions for sharing Advanced Usage Batch Link Papers:

Link multiple papers to one repository

for arxiv_id in "2301.12345" "2302.67890" "2303.11111" ; do uv run scripts/paper_manager.py link \ --repo-id "username/model-name" \ --repo-type "model" \ --arxiv-id " $arxiv_id " done Extract Paper Info:

Get paper metadata from arXiv

uv run scripts/paper_manager.py info \ --arxiv-id "2301.12345" \ --format "json" Generate Citation:

Create BibTeX citation

uv run scripts/paper_manager.py citation \ --arxiv-id "2301.12345" \ --format "bibtex" Validate Links:

Check all paper links in a repository

uv run scripts/paper_manager.py validate

\

--repo-id

"username/model-name"

\

--repo-type

"model"

Error Handling

Paper Not Found

arXiv ID doesn't exist or isn't indexed yet

Permission Denied

HF_TOKEN lacks write access to repository

Invalid YAML

Malformed metadata in README frontmatter

Authorship Failed

Email doesn't match paper author records

Already Claimed

Another user has claimed authorship

Rate Limiting

Too many API requests in short time

Troubleshooting

Issue

"Paper not found on Hugging Face"

Solution

Visit

hf.co/papers/{arxiv-id}

to trigger indexing

Issue

"Authorship claim not verified"

Solution

Wait for admin review or contact HF support with proof

Issue

"arXiv tag not appearing"

Solution

Ensure README includes proper arXiv URL format

Issue

"Cannot link to repository"

Solution

Verify HF_TOKEN has write permissions

Issue

"Template rendering errors"

Solution

Check markdown syntax and YAML frontmatter format Resources and References Hugging Face Paper Pages : hf.co/papers Model Cards Guide : hf.co/docs/hub/model-cards Dataset Cards Guide : hf.co/docs/hub/datasets-cards Research Article Template : tfrere/research-article-template arXiv Format Guide : arxiv.org/help/submit Integration with tfrere's Research Template This skill complements tfrere's research article template by providing: Automated paper indexing workflows Repository linking capabilities Metadata management tools Citation generation utilities You can use tfrere's template for writing, then use this skill to publish and link the paper on Hugging Face Hub. Common Patterns Pattern 1: New Paper Publication

Write → Publish → Index → Link

uv run scripts/paper_manager.py create --template modern --output paper.md

(Submit to arXiv)

uv run scripts/paper_manager.py index --arxiv-id "2301.12345" uv run scripts/paper_manager.py link --repo-id "user/model" --arxiv-id "2301.12345" Pattern 2: Existing Paper Discovery

Search → Check → Link

uv run scripts/paper_manager.py search --query "transformers" uv run scripts/paper_manager.py check --arxiv-id "2301.12345" uv run scripts/paper_manager.py link --repo-id "user/model" --arxiv-id "2301.12345" Pattern 3: Author Portfolio Management

Claim → Verify → Organize

uv run scripts/paper_manager.py claim --arxiv-id "2301.12345" uv run scripts/paper_manager.py list-my-papers uv run scripts/paper_manager.py toggle-visibility --arxiv-id "2301.12345" --show true API Integration Python Script Example: from scripts . paper_manager import PaperManager pm = PaperManager ( hf_token = "your_token" )

Index paper

pm . index_paper ( "2301.12345" )

Link to model

pm . link_paper ( repo_id = "username/model" , repo_type = "model" , arxiv_id = "2301.12345" , citation = "Full citation text" )

Check status

status

pm . check_paper ( "2301.12345" ) print ( status ) Future Enhancements Planned features for future versions: Support for non-arXiv papers (conference proceedings, journals) Automatic citation formatting from DOI Paper comparison and versioning tools Collaborative paper writing features Integration with LaTeX workflows Automated figure and table extraction Paper metrics and impact tracking